Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.24□□□□□ -0.93
Npas1P97459 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Npas1P97459 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Gm42879-201ENSMUST00000198656 2214 ntBASIC9.24□□□□□ -0.93
Npas1P97459 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.24□□□□□ -0.93
Npas1P97459 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Npas1P97459 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.23□□□□□ -0.93
Npas1P97459 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.23□□□□□ -0.93
Npas1P97459 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.23□□□□□ -0.93
Npas1P97459 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.23□□□□□ -0.93
Npas1P97459 Gm31256-201ENSMUST00000194705 506 ntBASIC9.23□□□□□ -0.93
Npas1P97459 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Npas1P97459 Gm6334-201ENSMUST00000207083 228 ntBASIC9.23□□□□□ -0.93
Npas1P97459 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.23□□□□□ -0.93
Npas1P97459 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Npas1P97459 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.23□□□□□ -0.93
Npas1P97459 Gm19409-201ENSMUST00000198244 2858 ntBASIC9.23□□□□□ -0.93
Npas1P97459 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Npas1P97459 Zfp672-202ENSMUST00000064786 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Npas1P97459 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.22□□□□□ -0.93
Npas1P97459 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Npas1P97459 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Npas1P97459 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Npas1P97459 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Npas1P97459 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Npas1P97459 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Npas1P97459 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Npas1P97459 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Npas1P97459 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Npas1P97459 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.22□□□□□ -0.93
Npas1P97459 Gm11930-201ENSMUST00000117788 190 ntBASIC9.22□□□□□ -0.93
Npas1P97459 Gm12463-201ENSMUST00000118271 849 ntBASIC9.22□□□□□ -0.93
Npas1P97459 Gm14109-201ENSMUST00000118814 309 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms