Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm18124-201ENSMUST00000210695 706 ntBASIC11.37□□□□□ -0.59
Cxcl12P40224 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm23458-201ENSMUST00000083257 169 ntBASIC11.37□□□□□ -0.59
Cxcl12P40224 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Cxcl12P40224 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cxcl12P40224 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.37□□□□□ -0.59
Cxcl12P40224 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.37□□□□□ -0.59
Cxcl12P40224 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Mir1190-201ENSMUST00000116925 96 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm14231-201ENSMUST00000120090 592 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm37944-201ENSMUST00000194233 414 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm5291-201ENSMUST00000201965 899 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Lect2-202ENSMUST00000225183 823 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cxcl12P40224 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.36□□□□□ -0.59
Cxcl12P40224 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl12P40224 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm23129-201ENSMUST00000104259 132 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm44304-201ENSMUST00000200509 145 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm8268-201ENSMUST00000209683 458 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl12P40224 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl12P40224 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms