Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Gm14278-201ENSMUST00000117381 878 ntBASIC16.16■□□□□ 0.18
Chd1P40201 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC16.16■□□□□ 0.18
Chd1P40201 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Gm5652-201ENSMUST00000182336 1008 ntBASIC16.16■□□□□ 0.18
Chd1P40201 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Chd1P40201 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chd1P40201 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC16.16■□□□□ 0.18
Chd1P40201 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Gm43165-201ENSMUST00000200842 1635 ntBASIC16.16■□□□□ 0.18
Chd1P40201 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.16■□□□□ 0.18
Chd1P40201 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC16.16■□□□□ 0.18
Chd1P40201 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC16.16■□□□□ 0.18
Chd1P40201 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC16.16■□□□□ 0.18
Chd1P40201 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Gm32072-201ENSMUST00000200803 1434 ntBASIC16.16■□□□□ 0.18
Chd1P40201 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd1P40201 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd1P40201 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC16.15■□□□□ 0.18
Chd1P40201 Gm25735-201ENSMUST00000175164 215 ntBASIC16.15■□□□□ 0.18
Chd1P40201 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC16.15■□□□□ 0.18
Chd1P40201 Ucma-205ENSMUST00000195688 554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd1P40201 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd1P40201 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Chd1P40201 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd1P40201 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC16.15■□□□□ 0.18
Chd1P40201 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1P40201 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chd1P40201 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chd1P40201 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chd1P40201 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Gm15032-201ENSMUST00000118547 411 ntBASIC16.14■□□□□ 0.17
Chd1P40201 Gm9516-201ENSMUST00000119684 424 ntBASIC16.14■□□□□ 0.17
Chd1P40201 Gm13472-201ENSMUST00000120948 314 ntBASIC16.14■□□□□ 0.17
Chd1P40201 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd1P40201 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd1P40201 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Cyp19a1-201ENSMUST00000034811 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Gm43362-201ENSMUST00000198192 2470 ntBASIC16.14■□□□□ 0.17
Chd1P40201 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Chd1P40201 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms