Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igh-VJ558P01758 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Igh-VJ558P01758 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms