Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm18391-201ENSMUST00000217189 658 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 AC149294.3-201ENSMUST00000226888 732 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm25125-201ENSMUST00000083340 136 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 AC116596.1-201ENSMUST00000228112 1762 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col4a6B1AVK5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm15476-201ENSMUST00000118247 1191 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm3945-201ENSMUST00000196637 683 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 CT025642.1-201ENSMUST00000224734 1219 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 AC123061.1-201ENSMUST00000228021 999 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm43625-201ENSMUST00000199177 1539 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm12420-201ENSMUST00000119869 1048 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm2328-201ENSMUST00000193525 535 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Gm6008-201ENSMUST00000206542 874 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 AC123533.3-201ENSMUST00000228056 454 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col4a6B1AVK5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.14□□□□□ -0.63
Col4a6B1AVK5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms