Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm25880-201ENSMUST00000104331 132 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm4294-201ENSMUST00000105169 614 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm15617-201ENSMUST00000118973 771 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm15549-201ENSMUST00000121595 622 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Olfml3-204ENSMUST00000169286 874 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm22877-201ENSMUST00000175451 105 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm29410-201ENSMUST00000188383 694 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm18561-201ENSMUST00000206027 804 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm13117-201ENSMUST00000120894 691 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm15329-201ENSMUST00000121408 155 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Mir6407-201ENSMUST00000184510 101 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm5100-201ENSMUST00000195631 589 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm6439-201ENSMUST00000199849 862 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm9353-201ENSMUST00000200472 604 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm5298-201ENSMUST00000201122 892 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm44158-201ENSMUST00000203881 505 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.29□□□□□ -0.76
Cdc40Q9DC48 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms