Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm7255-201ENSMUST00000187371 908 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm9463-201ENSMUST00000206707 601 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Nsd1-205ENSMUST00000224693 852 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trub1Q8C0D0 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm12663-201ENSMUST00000118481 958 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm38321-201ENSMUST00000195053 235 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm18561-201ENSMUST00000206027 804 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm8959-201ENSMUST00000213150 571 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm30671-201ENSMUST00000214898 318 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Id2-203ENSMUST00000222667 958 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm25580-201ENSMUST00000083409 327 ntBASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trub1Q8C0D0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms