Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.21□□□□□ -0.62
Sh3rf2Q8BZT2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm20414-201ENSMUST00000172918 646 ntBASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Platr10-202ENSMUST00000191479 818 ntBASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm19918-201ENSMUST00000194858 400 ntBASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf2Q8BZT2 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm13039-201ENSMUST00000118638 794 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm15036-201ENSMUST00000118880 400 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm11979-201ENSMUST00000119629 743 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm12712-201ENSMUST00000120676 801 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23400-201ENSMUST00000174994 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm26463-201ENSMUST00000175065 101 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm24332-201ENSMUST00000175102 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm24328-201ENSMUST00000175104 67 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25959-201ENSMUST00000175112 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm22475-201ENSMUST00000175169 102 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms