Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Erich3-203ENSMUST00000189969 3460 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm11980-201ENSMUST00000121445 986 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm13445-201ENSMUST00000121664 307 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm24248-201ENSMUST00000157321 322 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm8723-201ENSMUST00000166076 820 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm17192-201ENSMUST00000169031 511 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm8701-201ENSMUST00000169259 874 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm9111-201ENSMUST00000219394 709 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh8Q7TSK3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdh8Q7TSK3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms