Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm44936-201ENSMUST00000207324 735 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 AC129590.1-201ENSMUST00000225573 852 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 AC124555.1-201ENSMUST00000227051 880 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Atf7-201ENSMUST00000096143 390 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm12362-201ENSMUST00000121986 342 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm3052-201ENSMUST00000186409 829 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm37261-201ENSMUST00000194360 1101 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm44008-201ENSMUST00000204345 412 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm14111-201ENSMUST00000119851 999 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm29485-201ENSMUST00000190220 282 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gm8055-201ENSMUST00000099956 1008 ntBASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Spg11Q3UHA3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Gm9516-201ENSMUST00000119684 424 ntBASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Trav9n-1-201ENSMUST00000185224 339 ntBASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Gm7997-201ENSMUST00000210546 980 ntBASIC10.15□□□□□ -0.78
Spg11Q3UHA3 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Gm18065-201ENSMUST00000221395 526 ntBASIC10.15□□□□□ -0.78
Spg11Q3UHA3 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Spg11Q3UHA3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms