Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.98□□□□□ -0.49
CiitaP79621 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.98□□□□□ -0.49
CiitaP79621 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CiitaP79621 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Gm13600-201ENSMUST00000117949 744 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Gm13549-201ENSMUST00000118339 796 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Mir1893-201ENSMUST00000122565 83 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Gm9372-201ENSMUST00000168454 430 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Gm26989-201ENSMUST00000182608 749 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CiitaP79621 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CiitaP79621 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Gm25201-201ENSMUST00000083093 170 ntBASIC11.98□□□□□ -0.49
CiitaP79621 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.98□□□□□ -0.49
CiitaP79621 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CiitaP79621 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.97□□□□□ -0.49
CiitaP79621 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CiitaP79621 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.97□□□□□ -0.49
CiitaP79621 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
CiitaP79621 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Gm12783-201ENSMUST00000121425 397 ntBASIC11.97□□□□□ -0.49
CiitaP79621 Gm11980-201ENSMUST00000121445 986 ntBASIC11.97□□□□□ -0.49
CiitaP79621 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Gm24328-201ENSMUST00000175104 67 ntBASIC11.97□□□□□ -0.49
CiitaP79621 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.97□□□□□ -0.49
CiitaP79621 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
CiitaP79621 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.97□□□□□ -0.49
CiitaP79621 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.97□□□□□ -0.49
CiitaP79621 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.97□□□□□ -0.49
CiitaP79621 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.97□□□□□ -0.49
CiitaP79621 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CiitaP79621 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CiitaP79621 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CiitaP79621 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CiitaP79621 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms