Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm14052-201ENSMUST00000121434 1031 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC8.93□□□□□ -0.98
Lmo4P61969 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm16288-201ENSMUST00000137940 367 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm6677-201ENSMUST00000195100 441 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Gm43564-201ENSMUST00000196185 211 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Gm43547-201ENSMUST00000197729 328 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Gm44498-201ENSMUST00000199509 111 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC8.93□□□□□ -0.98
Lmo4P61969 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm7183-201ENSMUST00000213870 1005 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Gm8162-201ENSMUST00000213951 665 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 CT025679.1-201ENSMUST00000227106 449 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Gfra2-203ENSMUST00000227697 1323 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC8.93□□□□□ -0.98
Lmo4P61969 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm19178-201ENSMUST00000217524 1819 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 AC022682.1-201ENSMUST00000224624 2023 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 AC153380.1-201ENSMUST00000214959 2364 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Lmo4P61969 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm37058-201ENSMUST00000193393 1644 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm19680-201ENSMUST00000095050 1513 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Mir671-201ENSMUST00000102432 98 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm12947-201ENSMUST00000116114 420 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Gm22344-201ENSMUST00000122642 278 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC8.92□□□□□ -0.98
Lmo4P61969 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm27956-201ENSMUST00000175604 260 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm40414-201ENSMUST00000197608 481 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm6439-201ENSMUST00000199849 862 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC8.92□□□□□ -0.98
Lmo4P61969 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm45135-201ENSMUST00000206787 1184 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Gm44640-201ENSMUST00000206894 247 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Gm45094-201ENSMUST00000207013 617 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Gm2448-201ENSMUST00000207080 559 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC8.92□□□□□ -0.98
Lmo4P61969 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC8.92□□□□□ -0.98
Lmo4P61969 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms