Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm12389-201ENSMUST00000117696 418 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Gm13624-201ENSMUST00000120263 462 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.24□□□□□ -0.29
LtbrP50284 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gm20778-201ENSMUST00000178524 627 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gm26875-201ENSMUST00000181006 950 ntBASIC13.24□□□□□ -0.29
LtbrP50284 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.24□□□□□ -0.29
LtbrP50284 Mir8093-201ENSMUST00000185043 137 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Gm8641-201ENSMUST00000186995 826 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm19269-201ENSMUST00000211401 804 ntBASIC13.24□□□□□ -0.29
LtbrP50284 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 AC121986.1-201ENSMUST00000218588 781 ntBASIC13.24□□□□□ -0.29
LtbrP50284 AC126043.1-201ENSMUST00000221304 1141 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.24□□□□□ -0.29
LtbrP50284 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LtbrP50284 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LtbrP50284 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC13.23□□□□□ -0.29
LtbrP50284 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LtbrP50284 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.23□□□□□ -0.29
LtbrP50284 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
LtbrP50284 Gm22937-201ENSMUST00000103954 131 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC13.23□□□□□ -0.29
LtbrP50284 Gm24590-201ENSMUST00000116699 119 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Gm15329-201ENSMUST00000121408 155 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.23□□□□□ -0.29
LtbrP50284 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.23□□□□□ -0.29
LtbrP50284 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Gm8582-201ENSMUST00000164061 789 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LtbrP50284 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LtbrP50284 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC13.23□□□□□ -0.29
LtbrP50284 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LtbrP50284 Gm5982-201ENSMUST00000196234 512 ntBASIC13.23□□□□□ -0.29
LtbrP50284 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.23□□□□□ -0.29
LtbrP50284 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LtbrP50284 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.23□□□□□ -0.29
LtbrP50284 Gm6562-201ENSMUST00000221903 464 ntBASIC13.23□□□□□ -0.29
LtbrP50284 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.23□□□□□ -0.29
LtbrP50284 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LtbrP50284 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LtbrP50284 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
LtbrP50284 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms