Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl12P40224 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Gm5764-201ENSMUST00000118817 885 ntBASIC11.39□□□□□ -0.59
Cxcl12P40224 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.39□□□□□ -0.59
Cxcl12P40224 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.39□□□□□ -0.59
Cxcl12P40224 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.39□□□□□ -0.59
Cxcl12P40224 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cxcl12P40224 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl12P40224 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.38□□□□□ -0.59
Cxcl12P40224 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.38□□□□□ -0.59
Cxcl12P40224 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl12P40224 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl12P40224 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.37□□□□□ -0.59
Cxcl12P40224 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.37□□□□□ -0.59
Cxcl12P40224 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cxcl12P40224 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm12254-201ENSMUST00000134617 471 ntBASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl12P40224 Platr10-202ENSMUST00000191479 818 ntBASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm21631-201ENSMUST00000195041 754 ntBASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.37□□□□□ -0.59
Cxcl12P40224 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.37□□□□□ -0.59
Cxcl12P40224 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms