Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm10582-201ENSMUST00000097987 396 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Gm10583-201ENSMUST00000097988 396 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vcam1P29533 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vcam1P29533 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vcam1P29533 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Vcam1P29533 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.67□□□□□ -0.38
Vcam1P29533 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm15031-201ENSMUST00000121341 210 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm5526-201ENSMUST00000153604 423 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm24954-201ENSMUST00000178831 110 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm7928-201ENSMUST00000181249 701 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.67□□□□□ -0.38
Vcam1P29533 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm25514-201ENSMUST00000083860 135 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vcam1P29533 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.67□□□□□ -0.38
Vcam1P29533 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Vcam1P29533 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcam1P29533 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Vcam1P29533 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.66□□□□□ -0.38
Vcam1P29533 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vcam1P29533 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vcam1P29533 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Vcam1P29533 Gm13094-201ENSMUST00000117930 409 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Gm13204-201ENSMUST00000120110 821 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Gm26368-201ENSMUST00000157826 118 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Gm8601-201ENSMUST00000182096 909 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.66□□□□□ -0.38
Vcam1P29533 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Trav11n-201ENSMUST00000200113 343 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms