Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Mir6546-201ENSMUST00000184460 62 ntBASIC9.84□□□□□ -0.83
P20040 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
P20040 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.84□□□□□ -0.83
P20040 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
P20040 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.84□□□□□ -0.83
P20040 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.84□□□□□ -0.83
P20040 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.84□□□□□ -0.83
P20040 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
P20040 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.84□□□□□ -0.83
P20040 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.84□□□□□ -0.83
P20040 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.84□□□□□ -0.83
P20040 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
P20040 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
P20040 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.84□□□□□ -0.83
P20040 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
P20040 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.83□□□□□ -0.84
P20040 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
P20040 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
P20040 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
P20040 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
P20040 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
P20040 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
P20040 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.83□□□□□ -0.84
P20040 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
P20040 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.83□□□□□ -0.84
P20040 Gm15573-201ENSMUST00000119487 540 ntBASIC9.83□□□□□ -0.84
P20040 Gm11956-201ENSMUST00000119525 512 ntBASIC9.83□□□□□ -0.84
P20040 Gm11573-201ENSMUST00000119956 394 ntBASIC9.83□□□□□ -0.84
P20040 Gm8737-201ENSMUST00000122208 642 ntBASIC9.83□□□□□ -0.84
P20040 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Gm4726-201ENSMUST00000135604 736 ntBASIC9.83□□□□□ -0.84
P20040 Gm6019-201ENSMUST00000148369 736 ntBASIC9.83□□□□□ -0.84
P20040 Gm15881-201ENSMUST00000148792 942 ntBASIC9.83□□□□□ -0.84
P20040 Gm24844-201ENSMUST00000158679 127 ntBASIC9.83□□□□□ -0.84
P20040 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.83□□□□□ -0.84
P20040 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.83□□□□□ -0.84
P20040 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.83□□□□□ -0.84
P20040 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Gm10807-201ENSMUST00000177134 795 ntBASIC9.83□□□□□ -0.84
P20040 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.83□□□□□ -0.84
P20040 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
P20040 Gm43852-201ENSMUST00000202098 917 ntBASIC9.83□□□□□ -0.84
P20040 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Gm43916-201ENSMUST00000205062 967 ntBASIC9.83□□□□□ -0.84
P20040 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.83□□□□□ -0.84
P20040 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.83□□□□□ -0.84
P20040 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.83□□□□□ -0.84
P20040 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
P20040 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
P20040 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
P20040 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.83□□□□□ -0.84
P20040 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.83□□□□□ -0.84
P20040 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
P20040 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
P20040 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.83□□□□□ -0.84
P20040 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.83□□□□□ -0.84
P20040 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.83□□□□□ -0.84
P20040 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
P20040 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P20040 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.82□□□□□ -0.84
P20040 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
P20040 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms