Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdgfrbP05622 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.28□□□□□ -0.6
PdgfrbP05622 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdgfrbP05622 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdgfrbP05622 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.28□□□□□ -0.6
PdgfrbP05622 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdgfrbP05622 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
PdgfrbP05622 AC158595.1-201ENSMUST00000217989 1435 ntBASIC11.27□□□□□ -0.6
PdgfrbP05622 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
PdgfrbP05622 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdgfrbP05622 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
PdgfrbP05622 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm22588-201ENSMUST00000157510 140 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm37299-201ENSMUST00000193951 826 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm8190-201ENSMUST00000199603 586 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm44980-201ENSMUST00000205826 314 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm45118-201ENSMUST00000208928 825 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 AC158388.1-201ENSMUST00000225441 256 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
PdgfrbP05622 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
PdgfrbP05622 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm42479-201ENSMUST00000198654 1356 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.27□□□□□ -0.61
PdgfrbP05622 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm43435-201ENSMUST00000199996 1438 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PdgfrbP05622 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm8302-201ENSMUST00000119217 852 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm6461-201ENSMUST00000120015 633 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm12372-201ENSMUST00000121654 768 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm25109-201ENSMUST00000122474 114 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm37857-201ENSMUST00000191784 1199 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm44323-201ENSMUST00000198689 129 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm45398-201ENSMUST00000210561 165 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
PdgfrbP05622 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms