Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.19□□□□□ -0.94
CfdP03953 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Gm45224-201ENSMUST00000208203 414 ntBASIC9.19□□□□□ -0.94
CfdP03953 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.19□□□□□ -0.94
CfdP03953 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.19□□□□□ -0.94
CfdP03953 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.19□□□□□ -0.94
CfdP03953 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.19□□□□□ -0.94
CfdP03953 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
CfdP03953 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.19□□□□□ -0.94
CfdP03953 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.19□□□□□ -0.94
CfdP03953 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.19□□□□□ -0.94
CfdP03953 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.19□□□□□ -0.94
CfdP03953 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CfdP03953 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
CfdP03953 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
CfdP03953 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.18□□□□□ -0.94
CfdP03953 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.18□□□□□ -0.94
CfdP03953 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.18□□□□□ -0.94
CfdP03953 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.18□□□□□ -0.94
CfdP03953 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Snora78-201ENSMUST00000158630 128 ntBASIC9.18□□□□□ -0.94
CfdP03953 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.18□□□□□ -0.94
CfdP03953 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
CfdP03953 Gm8815-201ENSMUST00000173809 620 ntBASIC9.18□□□□□ -0.94
CfdP03953 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.18□□□□□ -0.94
CfdP03953 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm27530-201ENSMUST00000184096 98 ntBASIC9.18□□□□□ -0.94
CfdP03953 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.18□□□□□ -0.94
CfdP03953 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.18□□□□□ -0.94
CfdP03953 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.18□□□□□ -0.94
CfdP03953 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.18□□□□□ -0.94
CfdP03953 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.18□□□□□ -0.94
CfdP03953 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.18□□□□□ -0.94
CfdP03953 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm44651-201ENSMUST00000207343 372 ntBASIC9.18□□□□□ -0.94
CfdP03953 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.18□□□□□ -0.94
CfdP03953 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.18□□□□□ -0.94
CfdP03953 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
CfdP03953 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
CfdP03953 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
CfdP03953 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CfdP03953 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.17□□□□□ -0.94
CfdP03953 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CfdP03953 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CfdP03953 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
CfdP03953 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CfdP03953 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CfdP03953 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
CfdP03953 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms