Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gm8482-201ENSMUST00000117972 471 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gm13841-201ENSMUST00000118829 483 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gm11449-201ENSMUST00000119175 476 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gm8210-201ENSMUST00000178557 483 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gm15454-201ENSMUST00000179718 483 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 AC134913.2-201ENSMUST00000225017 771 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gm6344-201ENSMUST00000075962 483 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Gm9701-201ENSMUST00000077976 427 ntBASIC19.91■□□□□ 0.78
Ccdc180J3QNE4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm13192-201ENSMUST00000101199 208 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm24470-201ENSMUST00000104486 132 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm12397-201ENSMUST00000117674 615 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm10443-201ENSMUST00000119024 210 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm20568-201ENSMUST00000197129 208 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 AC154461.1-201ENSMUST00000224207 1005 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 AC187103.3-201ENSMUST00000225725 646 ntBASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc180J3QNE4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc180J3QNE4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc180J3QNE4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm4943-201ENSMUST00000132879 424 ntBASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm36982-201ENSMUST00000193796 1128 ntBASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm4778-201ENSMUST00000098878 1098 ntBASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Gm45719-201ENSMUST00000207954 1662 ntBASIC19.89■□□□□ 0.77
Ccdc180J3QNE4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm12435-201ENSMUST00000118949 1016 ntBASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm14034-201ENSMUST00000120147 551 ntBASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm28179-201ENSMUST00000188365 613 ntBASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm45527-201ENSMUST00000211052 774 ntBASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gm28624-201ENSMUST00000186430 2131 ntBASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 AC107763.1-201ENSMUST00000226082 1365 ntBASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc180J3QNE4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc180J3QNE4 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms