Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gm15374-201ENSMUST00000119313 844 ntBASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gm11244-201ENSMUST00000121243 237 ntBASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gm8574-201ENSMUST00000203207 924 ntBASIC9.41□□□□□ -0.9
Gm3550W4VSN7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.41□□□□□ -0.9
Gm3550W4VSN7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm25148-201ENSMUST00000104611 123 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm9089-201ENSMUST00000122027 526 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Olfr584-201ENSMUST00000098210 964 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm3550W4VSN7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Gm3550W4VSN7 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Gm3550W4VSN7 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.4□□□□□ -0.91
Gm3550W4VSN7 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Gm3550W4VSN7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm3550W4VSN7 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm3550W4VSN7 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms