Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Gm7833-201ENSMUST00000183288 990 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Gm43117-201ENSMUST00000198531 379 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Gm42689-201ENSMUST00000202403 404 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Gm3791-201ENSMUST00000220790 768 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scn11aQ9R053 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn11aQ9R053 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.96□□□□□ -0.34
Scn11aQ9R053 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.95□□□□□ -0.34
Scn11aQ9R053 Gm26943-201ENSMUST00000182295 957 ntBASIC12.95□□□□□ -0.34
Scn11aQ9R053 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.95□□□□□ -0.34
Scn11aQ9R053 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm22582-201ENSMUST00000102283 94 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm7242-201ENSMUST00000221134 705 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Mir705-201ENSMUST00000102058 82 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm7572-201ENSMUST00000182616 766 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm37688-201ENSMUST00000195195 465 ntBASIC12.94□□□□□ -0.34
Scn11aQ9R053 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn11aQ9R053 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms