Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdc40Q9DC48 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdc40Q9DC48 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.33□□□□□ -0.76
Cdc40Q9DC48 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm15744-201ENSMUST00000161734 213 ntBASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm19091-201ENSMUST00000208120 978 ntBASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdc40Q9DC48 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Gm11340-201ENSMUST00000119226 412 ntBASIC10.31□□□□□ -0.76
Cdc40Q9DC48 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Gm42867-201ENSMUST00000202995 469 ntBASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdc40Q9DC48 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdc40Q9DC48 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms