Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm11573-201ENSMUST00000119956 394 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm5616-201ENSMUST00000165252 384 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm8741-201ENSMUST00000174736 384 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm4978-201ENSMUST00000071565 801 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm7967-202ENSMUST00000191042 5042 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim13Q9CYB0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm25509-201ENSMUST00000116985 106 ntBASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm23958-201ENSMUST00000157207 105 ntBASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm25668-201ENSMUST00000157700 129 ntBASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm9353-201ENSMUST00000200472 604 ntBASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim13Q9CYB0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms