Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf135Q9CWS1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf135Q9CWS1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.55□□□□□ -0.56
Rnf135Q9CWS1 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf135Q9CWS1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf135Q9CWS1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf135Q9CWS1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm12218-201ENSMUST00000117666 399 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm11956-201ENSMUST00000119525 512 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm14585-201ENSMUST00000120713 634 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm7741-201ENSMUST00000181445 989 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm8574-201ENSMUST00000203207 924 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf135Q9CWS1 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm14193-201ENSMUST00000105067 153 ntBASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm11244-201ENSMUST00000121243 237 ntBASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm34023-201ENSMUST00000195539 217 ntBASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Olfr584-201ENSMUST00000098210 964 ntBASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf135Q9CWS1 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.52□□□□□ -0.56
Rnf135Q9CWS1 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf135Q9CWS1 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf135Q9CWS1 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf135Q9CWS1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms