Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm14592-201ENSMUST00000117201 560 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm9133-201ENSMUST00000118289 540 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm24398-201ENSMUST00000157870 109 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm45120-201ENSMUST00000208880 408 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm19009-201ENSMUST00000223072 823 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm25517-201ENSMUST00000083865 134 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm5599-201ENSMUST00000209602 788 ntBASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm10263-201ENSMUST00000085163 300 ntBASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tlr3Q99MB1 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.9□□□□□ -0.51
Tlr3Q99MB1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.89□□□□□ -0.51
Tlr3Q99MB1 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms