Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm14497-201ENSMUST00000119537 580 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Mir1893-201ENSMUST00000122565 83 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm5244-201ENSMUST00000164001 339 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Mir8091-201ENSMUST00000183602 139 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm34023-201ENSMUST00000195539 217 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm33080-201ENSMUST00000205429 172 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm7589-201ENSMUST00000085631 534 ntBASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp44Q8C2S0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Mir453-201ENSMUST00000104732 82 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm12389-201ENSMUST00000117696 418 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm11380-201ENSMUST00000118067 560 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm14270-201ENSMUST00000118388 846 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm12208-201ENSMUST00000122004 163 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm16030-201ENSMUST00000159098 603 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm7880-201ENSMUST00000203748 871 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Gm8162-201ENSMUST00000213951 665 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp44Q8C2S0 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.9□□□□□ -0.34
Usp44Q8C2S0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms