Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm22937-201ENSMUST00000103954 131 ntBASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm26272-201ENSMUST00000179241 132 ntBASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf2Q8BZT2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm14592-201ENSMUST00000117201 560 ntBASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm12453-201ENSMUST00000121981 331 ntBASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Sh3rf2Q8BZT2 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms