Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm15528-201ENSMUST00000117821 864 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm11451-201ENSMUST00000118946 630 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm29067-201ENSMUST00000190821 470 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm42657-201ENSMUST00000201746 211 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Mt1-202ENSMUST00000211807 1085 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Casc4Q6P2L7 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Gm43058-201ENSMUST00000197645 625 ntBASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.23□□□□□ -0.61
Casc4Q6P2L7 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms