Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm11546-201ENSMUST00000120297 354 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm14370-201ENSMUST00000122460 868 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm15273-201ENSMUST00000142302 868 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm7023-201ENSMUST00000147295 868 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm14357-201ENSMUST00000178352 868 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm14361-201ENSMUST00000178547 868 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm14348-201ENSMUST00000179183 868 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm27383-201ENSMUST00000184418 361 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm28391-201ENSMUST00000185202 379 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm29528-201ENSMUST00000186699 379 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm29526-201ENSMUST00000187217 379 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm6695-201ENSMUST00000177264 1172 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm18443-201ENSMUST00000185358 556 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm5668-201ENSMUST00000220897 436 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 CT025547.1-201ENSMUST00000225127 578 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm42589-201ENSMUST00000199097 1751 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 AC167019.2-201ENSMUST00000227335 845 ntBASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Spg11Q3UHA3 Gm26913-201ENSMUST00000182391 732 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms