Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm25677-201ENSMUST00000174983 72 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.28□□□□□ -0.6
Ebf1Q07802 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm37852-201ENSMUST00000193027 350 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm37365-201ENSMUST00000193109 409 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm43930-201ENSMUST00000203868 845 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm8255-201ENSMUST00000218693 305 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm40879-201ENSMUST00000220759 612 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf1Q07802 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Ebf1Q07802 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf1Q07802 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf1Q07802 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf1Q07802 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf1Q07802 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf1Q07802 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm14497-201ENSMUST00000119537 580 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm23400-201ENSMUST00000174994 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm26463-201ENSMUST00000175065 101 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm24332-201ENSMUST00000175102 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm25959-201ENSMUST00000175112 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm22475-201ENSMUST00000175169 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm22903-201ENSMUST00000175193 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm25070-201ENSMUST00000175237 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm24159-201ENSMUST00000175264 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm25299-201ENSMUST00000175283 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm23798-201ENSMUST00000175560 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm23802-201ENSMUST00000175565 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm25708-201ENSMUST00000177687 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm24370-201ENSMUST00000178007 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm23049-201ENSMUST00000178068 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm28019-201ENSMUST00000178138 101 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm25571-201ENSMUST00000178322 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm25355-201ENSMUST00000178456 101 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm24975-201ENSMUST00000178492 101 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm23189-201ENSMUST00000178954 102 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm25100-201ENSMUST00000179750 101 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm23064-201ENSMUST00000179866 101 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.27□□□□□ -0.61
Ebf1Q07802 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm44323-201ENSMUST00000198689 129 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm7525-201ENSMUST00000219425 454 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.27□□□□□ -0.61
Ebf1Q07802 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ebf1Q07802 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf1Q07802 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf1Q07802 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms