Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Otx1P80205 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Otx1P80205 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Otx1P80205 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Otx1P80205 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.59□□□□□ -0.87
Otx1P80205 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.59□□□□□ -0.87
Otx1P80205 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.59□□□□□ -0.87
Otx1P80205 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.59□□□□□ -0.87
Otx1P80205 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Gm10731-201ENSMUST00000181171 448 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Gm28032-201ENSMUST00000184104 96 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Otx1P80205 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.59□□□□□ -0.87
Otx1P80205 Gm37826-201ENSMUST00000195329 322 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Gm9645-201ENSMUST00000197131 792 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.59□□□□□ -0.87
Otx1P80205 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.59□□□□□ -0.87
Otx1P80205 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.59□□□□□ -0.87
Otx1P80205 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.59□□□□□ -0.87
Otx1P80205 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.59□□□□□ -0.87
Otx1P80205 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.59□□□□□ -0.87
Otx1P80205 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.59□□□□□ -0.87
Otx1P80205 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Otx1P80205 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.59□□□□□ -0.87
Otx1P80205 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.59□□□□□ -0.88
Otx1P80205 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Otx1P80205 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Otx1P80205 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Otx1P80205 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Otx1P80205 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Otx1P80205 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.58□□□□□ -0.88
Otx1P80205 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm16071-201ENSMUST00000119589 793 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.58□□□□□ -0.88
Otx1P80205 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.58□□□□□ -0.88
Otx1P80205 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm17826-201ENSMUST00000189720 798 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm8197-202ENSMUST00000193422 934 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm37299-201ENSMUST00000193951 826 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm37301-201ENSMUST00000195412 568 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm44323-201ENSMUST00000198689 129 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.58□□□□□ -0.88
Otx1P80205 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.58□□□□□ -0.88
Otx1P80205 Gm10020-201ENSMUST00000081993 612 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.58□□□□□ -0.88
Otx1P80205 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Otx1P80205 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.58□□□□□ -0.88
Otx1P80205 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Otx1P80205 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.58□□□□□ -0.88
Otx1P80205 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Otx1P80205 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms