Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rhbdl3P58873 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rhbdl3P58873 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rhbdl3P58873 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.12□□□□□ -0.31
Rhbdl3P58873 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rhbdl3P58873 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rhbdl3P58873 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.11□□□□□ -0.31
Rhbdl3P58873 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.11□□□□□ -0.31
Rhbdl3P58873 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Mir1249-201ENSMUST00000116791 98 ntBASIC13.11□□□□□ -0.31
Rhbdl3P58873 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Mir432-201ENSMUST00000157230 75 ntBASIC13.11□□□□□ -0.31
Rhbdl3P58873 Gm5244-201ENSMUST00000164001 339 ntBASIC13.11□□□□□ -0.31
Rhbdl3P58873 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.11□□□□□ -0.31
Rhbdl3P58873 AC174797.2-201ENSMUST00000225835 165 ntBASIC13.11□□□□□ -0.31
Rhbdl3P58873 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rhbdl3P58873 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.11□□□□□ -0.31
Rhbdl3P58873 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rhbdl3P58873 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Prss23os-202ENSMUST00000179361 1362 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm15625-201ENSMUST00000117617 1093 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm16288-201ENSMUST00000137940 367 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm25998-201ENSMUST00000175397 53 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm28671-201ENSMUST00000187036 692 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm18001-201ENSMUST00000212023 688 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.1□□□□□ -0.31
Rhbdl3P58873 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rhbdl3P58873 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.09□□□□□ -0.31
Rhbdl3P58873 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Gm11919-201ENSMUST00000117609 721 ntBASIC13.09□□□□□ -0.31
Rhbdl3P58873 Gm15982-201ENSMUST00000121681 554 ntBASIC13.09□□□□□ -0.31
Rhbdl3P58873 Gm25288-201ENSMUST00000122800 265 ntBASIC13.09□□□□□ -0.31
Rhbdl3P58873 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rhbdl3P58873 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms