Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rrp1P56183 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.46□□□□□ -0.41
Rrp1P56183 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rrp1P56183 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rrp1P56183 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Gm4909-201ENSMUST00000118749 794 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.46□□□□□ -0.41
Rrp1P56183 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Gm9089-201ENSMUST00000122027 526 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Gm25492-201ENSMUST00000157383 129 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rrp1P56183 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.46□□□□□ -0.41
Rrp1P56183 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Gm43186-201ENSMUST00000198130 824 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.46□□□□□ -0.41
Rrp1P56183 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rrp1P56183 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rrp1P56183 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rrp1P56183 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.46□□□□□ -0.42
Rrp1P56183 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rrp1P56183 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rrp1P56183 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
Rrp1P56183 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm13809-201ENSMUST00000117921 597 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Rrp1P56183 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.45□□□□□ -0.42
Rrp1P56183 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm17040-202ENSMUST00000170597 889 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Rrp1P56183 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm43138-201ENSMUST00000199123 708 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Gm2517-201ENSMUST00000215651 348 ntBASIC12.45□□□□□ -0.42
Rrp1P56183 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.45□□□□□ -0.42
Rrp1P56183 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Rrp1P56183 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Rrp1P56183 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rrp1P56183 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rrp1P56183 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rrp1P56183 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rrp1P56183 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms