Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LtbrP50284 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.27□□□□□ -0.29
LtbrP50284 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.27□□□□□ -0.29
LtbrP50284 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Gm4294-201ENSMUST00000105169 614 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Gm16219-201ENSMUST00000120096 274 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Gm15549-201ENSMUST00000121595 622 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.26□□□□□ -0.29
LtbrP50284 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.26□□□□□ -0.29
LtbrP50284 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC13.26□□□□□ -0.29
LtbrP50284 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Gm37851-201ENSMUST00000193871 889 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC13.26□□□□□ -0.29
LtbrP50284 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Gm4903-201ENSMUST00000210462 405 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC13.26□□□□□ -0.29
LtbrP50284 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LtbrP50284 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LtbrP50284 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LtbrP50284 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LtbrP50284 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.26□□□□□ -0.29
LtbrP50284 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LtbrP50284 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LtbrP50284 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LtbrP50284 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LtbrP50284 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LtbrP50284 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LtbrP50284 Gm11475-201ENSMUST00000118482 476 ntBASIC13.25□□□□□ -0.29
LtbrP50284 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC13.25□□□□□ -0.29
LtbrP50284 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.25□□□□□ -0.29
LtbrP50284 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LtbrP50284 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.25□□□□□ -0.29
LtbrP50284 Gm9372-201ENSMUST00000168454 430 ntBASIC13.25□□□□□ -0.29
LtbrP50284 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Gm18010-201ENSMUST00000203553 202 ntBASIC13.25□□□□□ -0.29
LtbrP50284 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.25□□□□□ -0.29
LtbrP50284 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.25□□□□□ -0.29
LtbrP50284 CT025603.1-201ENSMUST00000224040 448 ntBASIC13.25□□□□□ -0.29
LtbrP50284 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.25□□□□□ -0.29
LtbrP50284 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.25□□□□□ -0.29
LtbrP50284 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LtbrP50284 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LtbrP50284 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LtbrP50284 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LtbrP50284 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms