Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Snord23-201ENSMUST00000116828 109 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm16165-201ENSMUST00000160140 795 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm9372-201ENSMUST00000168454 430 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm44814-201ENSMUST00000207018 434 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm18204-201ENSMUST00000209835 793 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm5178-201ENSMUST00000219380 898 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm10020-201ENSMUST00000081993 612 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.51□□□□□ -0.73
Nkx2-6P43688 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-6P43688 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm15196-201ENSMUST00000121406 482 ntBASIC10.5□□□□□ -0.73
Nkx2-6P43688 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm37365-201ENSMUST00000193109 409 ntBASIC10.5□□□□□ -0.73
Nkx2-6P43688 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm42430-201ENSMUST00000197209 616 ntBASIC10.5□□□□□ -0.73
Nkx2-6P43688 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.5□□□□□ -0.73
Nkx2-6P43688 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Capsl-202ENSMUST00000226688 739 ntBASIC10.5□□□□□ -0.73
Nkx2-6P43688 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.5□□□□□ -0.73
Nkx2-6P43688 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-6P43688 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.49□□□□□ -0.73
Nkx2-6P43688 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.49□□□□□ -0.73
Nkx2-6P43688 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms