Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm5808-201ENSMUST00000178090 357 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Gm44498-201ENSMUST00000199509 111 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm35960-201ENSMUST00000202712 767 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Gm6518-201ENSMUST00000208450 342 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Cdx2P43241 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx2P43241 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx2P43241 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Cdx2P43241 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Cdx2P43241 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Mir1893-201ENSMUST00000122565 83 ntBASIC10.54□□□□□ -0.72
Cdx2P43241 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm5526-201ENSMUST00000153604 423 ntBASIC10.54□□□□□ -0.72
Cdx2P43241 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Cdx2P43241 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.54□□□□□ -0.72
Cdx2P43241 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.54□□□□□ -0.72
Cdx2P43241 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.54□□□□□ -0.72
Cdx2P43241 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cdx2P43241 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Cdx2P43241 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.54□□□□□ -0.72
Cdx2P43241 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx2P43241 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx2P43241 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.53□□□□□ -0.72
Cdx2P43241 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 Gm24933-201ENSMUST00000103762 110 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Gm23252-201ENSMUST00000103776 110 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cdx2P43241 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Gm13171-201ENSMUST00000117233 391 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Gm24943-201ENSMUST00000158329 433 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms