Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
VhlP40338 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.08□□□□□ -0.96
VhlP40338 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.08□□□□□ -0.96
VhlP40338 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.08□□□□□ -0.96
VhlP40338 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.08□□□□□ -0.96
VhlP40338 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.08□□□□□ -0.96
VhlP40338 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.08□□□□□ -0.96
VhlP40338 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
VhlP40338 Gm5996-201ENSMUST00000211110 718 ntBASIC9.08□□□□□ -0.96
VhlP40338 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
VhlP40338 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.08□□□□□ -0.96
VhlP40338 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.08□□□□□ -0.96
VhlP40338 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
VhlP40338 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VhlP40338 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VhlP40338 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.07□□□□□ -0.96
VhlP40338 Gm13996-201ENSMUST00000118456 430 ntBASIC9.07□□□□□ -0.96
VhlP40338 Gm13263-201ENSMUST00000121271 838 ntBASIC9.07□□□□□ -0.96
VhlP40338 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 Gm26361-201ENSMUST00000158868 186 ntBASIC9.07□□□□□ -0.96
VhlP40338 Gm16570-201ENSMUST00000161951 436 ntBASIC9.07□□□□□ -0.96
VhlP40338 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VhlP40338 Gm17376-201ENSMUST00000166016 84 ntBASIC9.07□□□□□ -0.96
VhlP40338 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VhlP40338 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VhlP40338 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VhlP40338 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VhlP40338 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.07□□□□□ -0.96
VhlP40338 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms