Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm17877-201ENSMUST00000192578 814 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm43520-201ENSMUST00000197996 164 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm9353-201ENSMUST00000200472 604 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm45550-201ENSMUST00000209380 946 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.07□□□□□ -0.48
Chmp6P0C0A3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Gm37458-201ENSMUST00000194055 410 ntBASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp6P0C0A3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm44329-201ENSMUST00000197469 112 ntBASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp6P0C0A3 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms