Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.71□□□□□ -0.86
P04224 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
P04224 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
P04224 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
P04224 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.7□□□□□ -0.86
P04224 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Btrc-206ENSMUST00000224102 3037 ntBASIC9.7□□□□□ -0.86
P04224 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.7□□□□□ -0.86
P04224 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.7□□□□□ -0.86
P04224 Gm11930-201ENSMUST00000117788 190 ntBASIC9.7□□□□□ -0.86
P04224 Gm12957-201ENSMUST00000117835 377 ntBASIC9.7□□□□□ -0.86
P04224 Gm12463-201ENSMUST00000118271 849 ntBASIC9.7□□□□□ -0.86
P04224 Gm12241-201ENSMUST00000118330 726 ntBASIC9.7□□□□□ -0.86
P04224 Gm15004-201ENSMUST00000119192 630 ntBASIC9.7□□□□□ -0.86
P04224 Gm11660-201ENSMUST00000120955 412 ntBASIC9.7□□□□□ -0.86
P04224 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.7□□□□□ -0.86
P04224 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Gm2991-201ENSMUST00000173338 480 ntBASIC9.7□□□□□ -0.86
P04224 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.7□□□□□ -0.86
P04224 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.7□□□□□ -0.86
P04224 Gm43962-201ENSMUST00000203898 190 ntBASIC9.7□□□□□ -0.86
P04224 Gm18065-201ENSMUST00000221395 526 ntBASIC9.7□□□□□ -0.86
P04224 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
P04224 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.7□□□□□ -0.86
P04224 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
P04224 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.7□□□□□ -0.86
P04224 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.7□□□□□ -0.86
P04224 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.7□□□□□ -0.86
P04224 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.7□□□□□ -0.86
P04224 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.7□□□□□ -0.86
P04224 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04224 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
P04224 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.69□□□□□ -0.86
P04224 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.69□□□□□ -0.86
P04224 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
P04224 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Gm14109-201ENSMUST00000118814 309 ntBASIC9.69□□□□□ -0.86
P04224 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.69□□□□□ -0.86
P04224 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.69□□□□□ -0.86
P04224 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Gm17420-201ENSMUST00000164753 153 ntBASIC9.69□□□□□ -0.86
P04224 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
P04224 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.69□□□□□ -0.86
P04224 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.69□□□□□ -0.86
P04224 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.69□□□□□ -0.86
P04224 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
P04224 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.69□□□□□ -0.86
P04224 Gm18062-201ENSMUST00000208020 547 ntBASIC9.69□□□□□ -0.86
P04224 Gm18055-201ENSMUST00000208254 547 ntBASIC9.69□□□□□ -0.86
P04224 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.69□□□□□ -0.86
P04224 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.69□□□□□ -0.86
P04224 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04224 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms