Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Gm19798-201ENSMUST00000201502 457 ntBASIC11.19□□□□□ -0.62
Col4a6B1AVK5 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 AC174647.1-201ENSMUST00000227419 1271 ntBASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm22582-201ENSMUST00000102283 94 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm24161-201ENSMUST00000104592 130 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Mir7088-201ENSMUST00000184227 86 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm5291-201ENSMUST00000201965 899 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col4a6B1AVK5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm23999-201ENSMUST00000158057 104 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm20474-201ENSMUST00000180089 596 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm8824-201ENSMUST00000182962 990 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm27675-201ENSMUST00000184527 94 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm8022-201ENSMUST00000191763 904 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 AC165092.1-201ENSMUST00000224018 486 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms