Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Lect2-202ENSMUST00000225183 823 ntBASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rrp8Q9DB85 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm24279-201ENSMUST00000104236 131 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm18733-202ENSMUST00000174447 401 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm25998-201ENSMUST00000175397 53 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rrp8Q9DB85 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rrp8Q9DB85 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.67
Rrp8Q9DB85 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rrp8Q9DB85 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rrp8Q9DB85 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.9□□□□□ -0.67
Rrp8Q9DB85 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rrp8Q9DB85 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Rrp8Q9DB85 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gm37197-201ENSMUST00000195607 401 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms