Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm9133-201ENSMUST00000118289 540 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm8302-201ENSMUST00000119217 852 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm12516-201ENSMUST00000120819 385 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm29787-201ENSMUST00000222129 849 ntBASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm15197-201ENSMUST00000120526 478 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm14665-201ENSMUST00000122294 557 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm19246-201ENSMUST00000173599 255 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm44545-201ENSMUST00000208262 746 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm5599-201ENSMUST00000209602 788 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm10020-201ENSMUST00000081993 612 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp2aQ9DB34 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms