Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm23272-201ENSMUST00000104053 129 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm12165-201ENSMUST00000117047 342 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm4909-201ENSMUST00000118749 794 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm23045-201ENSMUST00000175041 96 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm21092-201ENSMUST00000178995 955 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Mir7686-201ENSMUST00000200604 57 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm44315-201ENSMUST00000203041 219 ntBASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cchcr1Q8K2I2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm23105-201ENSMUST00000083719 134 ntBASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms