Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm15615-201ENSMUST00000118876 198 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm37284-201ENSMUST00000193607 539 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Gm22144-201ENSMUST00000157402 102 ntBASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Gm24992-201ENSMUST00000157412 130 ntBASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc38Q8CDN8 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm12165-201ENSMUST00000117047 342 ntBASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm13045-201ENSMUST00000119019 712 ntBASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm8302-201ENSMUST00000119217 852 ntBASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm14395-201ENSMUST00000120494 563 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms