Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm13461-201ENSMUST00000120980 662 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm8199-201ENSMUST00000121323 823 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm15329-201ENSMUST00000121408 155 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm15549-201ENSMUST00000121595 622 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm23085-201ENSMUST00000157849 293 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm24074-201ENSMUST00000158178 260 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm7504-201ENSMUST00000201449 424 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm5302-201ENSMUST00000202130 796 ntBASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Nhlrc3Q8CCH2 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm12501-201ENSMUST00000119163 529 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm29499-201ENSMUST00000189151 486 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm28329-201ENSMUST00000191208 689 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm29171-201ENSMUST00000191397 486 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm37597-201ENSMUST00000191853 382 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm18730-201ENSMUST00000218038 343 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm8385-201ENSMUST00000058999 643 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm21811-201ENSMUST00000096485 930 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nhlrc3Q8CCH2 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms