Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm11801-201ENSMUST00000117807 746 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm15617-201ENSMUST00000118973 771 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm25951-201ENSMUST00000175330 64 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm18776-201ENSMUST00000188833 654 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm10020-201ENSMUST00000081993 612 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm25201-201ENSMUST00000083093 170 ntBASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh8Q7TSK3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm11560-201ENSMUST00000117567 948 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm12218-201ENSMUST00000117666 399 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm16030-201ENSMUST00000159098 603 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Mir483-201ENSMUST00000093631 73 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh8Q7TSK3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms