Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm16441-201ENSMUST00000138176 924 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm6038-201ENSMUST00000154310 948 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm5976-201ENSMUST00000180794 996 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm27444-201ENSMUST00000184157 137 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm8226-201ENSMUST00000190511 798 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm6677-201ENSMUST00000195100 441 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm44420-201ENSMUST00000203669 490 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm45310-201ENSMUST00000210436 275 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.63□□□□□ -0.39
Ddx55Q6ZPL9 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm15258-201ENSMUST00000153801 741 ntBASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm4705-201ENSMUST00000177415 354 ntBASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm3527-201ENSMUST00000198905 460 ntBASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms