Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 n-R5s130-201ENSMUST00000178128 119 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm24312-201ENSMUST00000178677 119 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 n-R5s106-201ENSMUST00000179060 119 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 n-R5s118-201ENSMUST00000179887 119 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm29164-201ENSMUST00000185454 1024 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm43761-201ENSMUST00000202132 991 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm43460-201ENSMUST00000202491 1057 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 AC159002.1-201ENSMUST00000226714 924 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm6378-201ENSMUST00000084199 444 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm12424-201ENSMUST00000179673 447 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm37723-201ENSMUST00000194480 565 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gnpnat1-202ENSMUST00000226276 710 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 AC154589.2-201ENSMUST00000228847 251 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm37651-201ENSMUST00000194679 1494 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm5739-201ENSMUST00000208601 1703 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Gm11700-201ENSMUST00000119409 403 ntBASIC8.46□□□□□ -1.05
NipblQ6KCD5 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Gm18733-202ENSMUST00000174447 401 ntBASIC8.46□□□□□ -1.05
NipblQ6KCD5 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC8.46□□□□□ -1.05
NipblQ6KCD5 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Gm35412-201ENSMUST00000220437 999 ntBASIC8.46□□□□□ -1.05
NipblQ6KCD5 AC124772.3-201ENSMUST00000222535 575 ntBASIC8.46□□□□□ -1.05
NipblQ6KCD5 AC134913.2-201ENSMUST00000225017 771 ntBASIC8.46□□□□□ -1.05
NipblQ6KCD5 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Nupl1-206ENSMUST00000225111 2936 ntBASIC8.46□□□□□ -1.05
NipblQ6KCD5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
NipblQ6KCD5 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NipblQ6KCD5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Gm6758-201ENSMUST00000119643 1055 ntBASIC8.46□□□□□ -1.06
NipblQ6KCD5 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC8.46□□□□□ -1.06
NipblQ6KCD5 H2-Pb-201ENSMUST00000172731 531 ntBASIC8.46□□□□□ -1.06
NipblQ6KCD5 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC8.46□□□□□ -1.06
NipblQ6KCD5 Gm18164-201ENSMUST00000213769 927 ntBASIC8.46□□□□□ -1.06
NipblQ6KCD5 Gm18166-201ENSMUST00000215557 927 ntBASIC8.46□□□□□ -1.06
NipblQ6KCD5 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms