Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm7539-201ENSMUST00000189789 630 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Gm8828-201ENSMUST00000196786 1290 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Gm44304-201ENSMUST00000200509 145 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 AC192333.3-201ENSMUST00000224041 463 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 CT009550.1-201ENSMUST00000225750 864 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm14571-201ENSMUST00000118292 570 ntBASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm9574-201ENSMUST00000173127 845 ntBASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm42859-201ENSMUST00000199572 193 ntBASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm42867-201ENSMUST00000202995 469 ntBASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b2Q3UJB0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Defa-ps16-201ENSMUST00000121939 171 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm6686-201ENSMUST00000178455 258 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm9409-201ENSMUST00000197017 316 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm42599-201ENSMUST00000201308 469 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 CU025215.1-201ENSMUST00000222986 603 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 CT025618.1-201ENSMUST00000227409 1279 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms