Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm25226-201ENSMUST00000158198 123 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm37986-201ENSMUST00000193285 383 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm14724-201ENSMUST00000118400 537 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm15711-201ENSMUST00000118889 535 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm12380-201ENSMUST00000119012 544 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm27552-201ENSMUST00000183351 62 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm27844-201ENSMUST00000183613 62 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm28746-201ENSMUST00000187453 380 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm43058-201ENSMUST00000197645 625 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm5996-201ENSMUST00000211110 718 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim43aQ3TL54 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.75□□□□□ -0.53
Trim43aQ3TL54 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Gm25732-201ENSMUST00000175168 60 ntBASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms